[OTDev] TUM services partially down
Stefan Kramer kramer at in.tum.deFri Apr 1 15:46:16 CEST 2011
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Dear Partners, Friends, Colleagues, I just wanted to inform you that Tobias is working in a different project from today on. He is still available with his advice and expertise, but for practical questions please contact Jörg Wicker (joerg.wicker at in.tum.de) and Fabian Buchwald (fabian.buchwald@ in.tum.de). Thank you! Best regards, Stefan -------------------------------------------------------------- Prof. Dr. Stefan Kramer phone: +49-89-289-19411 Technische Universitaet Muenchen fax: +49-89-289-19414 Institut fuer Informatik/I12 email: kramer at in.tum.de Boltzmannstr. 3 room: MI 01.09.044 D-85748 Garching b. Muenchen, Germany http://wwwkramer.in.tum.de -------------------------------------------------------------- Om schrieb: > Hi Tobias, > > I would like to use the gSPAN modules from your source code for the > structural clustering. I wish to integrate these steps locally (through > netbeans project) as I have large datasets to work on ( and our network > connection is intermittent - so that uploads to ambit are likely to fail) > and I also want to run the code as efficiently and natively as possible. > > Could you please point out which source files within the source directory > (and dependencies) contain the code to do the above ? > > Also I would just like to add that I tried using the OpenTox services for > TUM and could not get past the "The server understood the request, but is > refusing to fulfill it" etc ... error message. I am assuming it was an A&A > issue so i tried the following > > curl -i -d "username=ompandey" -d "password=*******" > http://opensso.in-silico.ch/auth/authenticate?uri=service=openldap > > I got the token and tried (with and without url-encoding) > > curl -i -d > "subjectid=AQIC5wM2LY4SfcwnbJmuQevLWTGO%2BkNqbUaqOdwH1tW0iN0%3D%40AAJTSQACMDE%3D%23" > -d 'dataset_uri=http://apps.ideaconsult.net:8080/ambit2/dataset/23793?max=10' > -d 'threshold=0.50' > http://opentox.informatik.tu-muenchen.de:8080/OpenTox-dev/algorithm/StructuralClustering > > but it did not work. > > Could you please enumerate the correct set of steps involved in getting the > result from this algorithm? > > Regards > Om > > On Wed, Feb 23, 2011 at 4:27 PM, Tobias Girschick < > tobias.girschick at in.tum.de> wrote: > >> Hi All, >> >> TUM services running on >> http://opentox.informatik.tu-muenchen.de:8080/OpenTox-dev will be down for >> the next 1 or 2 hours. The non-AA secured services are still available at: >> >> http://opentox.informatik.tu-muenchen.de:8080/OpenTox-noAA >> >> When the OpenTox-dev services are up again, this will be the AA secured >> version. >> >> best regards, >> Tobias >> -- >> >> Dipl.-Bioinf. Tobias Girschick >> >> Technische Universität München >> Institut für Informatik >> Lehrstuhl I12 - Bioinformatik >> Bolzmannstr. 3 >> 85748 Garching b. München, Germany >> >> Room: MI 01.09.042 >> Phone: +49 (89) 289-18002 >> Email: tobias.girschick at in.tum.de <mailto:tobias.girschick at in.tum.de> >> Web: http://wwwkramer.in.tum.de/girschick >> >> _______________________________________________ >> Development mailing list >> Development at opentox.org >> http://www.opentox.org/mailman/listinfo/development >> > _______________________________________________ > Development mailing list > Development at opentox.org > http://www.opentox.org/mailman/listinfo/development
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