[OTDev] RDF papers, REST/rdf use within Ambit and OpenTox
Barry Hardy barry.hardy at douglasconnect.comFri May 20 12:28:49 CEST 2011
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Egon has sent over this summary of interesting papers on RDF just published and based on last Autumn's ACS session. The papers are available in Open Access at http://www.jcheminf.com/ The paper by Nina and Vedrin on Ambit contains a well written explanation of the combined use of rdf and REST within the OpenTox Framework and APIs. Barry As part of a Thematic Series that will come online shortly, a few papers have appeared summarizing a symposium on RDF technologies in chemistry (two more to come later), one of which is a paper by Nina et al. on their OpenTox API implementation. Editorial Resource description framework technologies in chemistry Egon L Willighagen, Martin P Brändle Journal of Cheminformatics 2011, 3:15 (13 May 2011) Software AMBIT RESTful web services: an implementation of the OpenTox application programming interface Nina Jeliazkova, Vedrin Jeliazkov Journal of Cheminformatics 2011, 3:18 (16 May 2011) Methodology Semantic Web integration of cheminformatics resources with the SADI framework Leonid L Chepelev, Michel Dumontier Journal of Cheminformatics 2011, 3:16 (16 May 2011) Research article ChemicalTagger: A tool for semantic text-mining in chemistry Lezan Hawizy, David M. Jessop, Nico Adams, Peter Murray-Rust Journal of Cheminformatics 2011, 3:17 (16 May 2011) Preliminary communication Linked open drug data for pharmaceutical research and development Matthias Samwald, Anja Jentzsch, Christopher Bouton, Claus Stie Kallesoe, Egon Willighagen, Janos Hajagos, M Scott Marshall, Eric Prud'hommeaux, Oktie Hassenzadeh, Elgar Pichler, Susie Stephens Journal of Cheminformatics 2011, 3:19 (16 May 2011) Egon -- Dr E.L. Willighagen Postdoctoral Researcher Institutet för miljömedicin Karolinska Institutet (http://ki.se/imm) Homepage: http://egonw.github.com/ LinkedIn: http://se.linkedin.com/in/egonw Blog: http://chem-bla-ics.blogspot.com/ PubList: http://www.citeulike.org/user/egonw/tag/papers
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