[OTDev] ToxCreate integration of Ambit classification datasets
Nina Jeliazkova jeliazkova.nina at gmail.comFri May 6 15:23:28 CEST 2011
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Hi Martin, On 6 May 2011 15:57, Martin Guetlein <martin.guetlein at googlemail.com> wrote: > > > Hi Nina, > > I noticed the following, the property ot:acceptValue of feature/21573 is > available here: > > curl http://apps.ideaconsult.net:8080/ambit2/dataset/9 -H > "accept:application/turtle" > > <ot:Feature rdf:about=" > http://apps.ideaconsult.net:8080/ambit2/feature/21573"> > <rdf:type rdf:resource="http://www.opentox.org/api/1.1#NominalFeature > "></rdf:type> > <ot:acceptValue>3.0</ot:acceptValue> > <ot:acceptValue>1.0</ot:acceptValue> > <ot:acceptValue>2.0</ot:acceptValue> > <rdf:type rdf:resource="http://www.opentox.org/api/1.1#NumericFeature > "></rdf:type> > <dc:creator>http://www.epa.gov/NCCT/dsstox/sdf_isscan_external.html > </dc:creator> > <ot:hasSource>ISSCAN_v3a_1153_19Sept08.1222179139.sdf</ot:hasSource> > <owl:sameAs rdf:resource=" > http://www.opentox.org/echaEndpoints.owl#Carcinogenicity"></owl:sameAs> > <ot:units></ot:units> > <dc:title>Canc</dc:title> > > but its missing here: > > curl http://apps.ideaconsult.net:8080/ambit2/dataset/9/features -H > "accept:application/turtle" > > <ot:NumericFeature rdf:about="feature/21573"> > <dc:creator>http://www.epa.gov/NCCT/dsstox/sdf_isscan_external.html > </dc:creator> > <ot:hasSource > rdf:resource="dataset/ISSCAN_v3a_1153_19Sept08.1222179139.sdf"/> > <owl:sameAs rdf:resource=" > http://www.opentox.org/echaEndpoints.owl#Carcinogenicity"/> > <ot:units></ot:units> > <dc:title>Canc</dc:title> > <rdf:type rdf:resource="http://www.opentox.org/api/1.1#NominalFeature > "/> > <rdf:type rdf:resource="http://www.opentox.org/api/1.1#Feature"/> > </ot:NumericFeature> > > I would need acceptValue for validation purposes (and our dataset parsing > routine uses the latter request for feature metadata). Could you fix that? > > It will be not trivial, because ot:acceptValue depends on the dataset ... You do receive the acceptValue when receiving the dataset though, so you should have this information. Nina
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